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BioBox is a data analytics platform for scientists working with next-generation sequencing data.
About Us
88 College St.
Toronto, Canada M5G 1L4
2021 BioBox Analytics Inc.
Gene Expression
Identify & explore your up- and down-regulated genes in a fraction of the time
Attend a free webinar to learn how to achieve a gene expression analysis in the BioBox Platform.
Gene Expression in the BioBox Platform
The BioBox Platform equips scientists with the tools to work with their data seamlessly from start to finish. The user-friendly interface accelerates time to scientific discovery by enabling scientists to conduct rapid analysis in a collaborative suite.
• Build and configure complex pipelines to align, annotate and process your raw data
• Leverage a built-in, interactive GUI to connect workflows (like STAR and DESeq2) without the use of command line
• Run your bulk RNAseq pipelines in the cloud
• Generate processed data files (Differential Expression & geneCounts Matrix files) that are automatically saved to your BioBox Library to be used with other powerful features within the platform
Mus musculus
• Create an analysis using your Differential Expression or geneCounts datasets - either process your FASTQ data in the platform, or use the processed files sent to you by your Bioinformatician
• Auto-generate customizable and dynamic volcano plots, scatter plots and heatmaps
• Manipulate and filter your data to instantly see these changes reflected in your visualizations and insights
• Leverage consolidated insights for popular public databases (like KEGG, EnrichR and Gene Ontology) and connect these insights to observations within your data
Mus musculus
• Search for your gene of interest in the Knowledge Engine and gain access to a plethora of information at the click of a button
• Discover relationships between your gene of interest and your own datasets
• Connect data from multiple public consortiums to your searched gene to explore deeper insights
• Explore gene sets, observations, annotations, gene network maps and disease
Mus musculus
Comprehensive Features
• Unlimited samples analysis
• Accepts raw data files: BAM and FASTQ
• Accepts processed data files: Differential Expression and Gene Counts
• Supports FASTQC, STAR and DESeq2 workflows
• Customizable workflow settings
• Pipeline Design Studio
• Plotting capabilities - bar plots, scatter plots, heatmaps and lollipops
• Interactive data tables, plots and insights
• Customizable & downloadable plots
• Gene-set enrichment analysis (GSEA)
• Consolidated insights from KEGG, Reactome, Gene Ontology, Enrichr, OMIM, ClinVar 2019, InterPro, GeneSigDB, CORUM
• Knowledge Engine
• Preloaded genomic reference data
Mutational Analysis
Identify SNVs and use lollipop plots to visualize your data.
Knowledge Engine
Search for your gene of interest and return a plethora of information.
Get Started Today.
Pricing Plans